Function reference • omicser

All functions
`compute_de_table()`	compute_de_table = helper function to create differential expression table
`display_document()`	Display a document in Shiny.
`get_config()`	get_config: helper for reading the Config file containing information about the databases
`get_db_conf()`	get_db_conf: helper for reading the database config
`get_db_meta()`	get_db_meta: helper for reading the database meta data
`includeRMarkdown()`	Include Content From a File
`pack_anndata_from_csv()`	pack_anndata
`pack_anndata_from_seurat()`	pack_anndata_from_seurat
`run_app()`	Run the Shiny Application
`run_defaults()`	run_defai;ts - shortcut to launch with default settings.
`run_docker()`	run_dockers - shortcut to launch with default settings for the docker container
`run_in_browser()`	run_in_browser - shortcut to launch in_browser
`setup_database()`	setup_database
`volcano_plot()`	Create volcano plot
`word_to_markdown()`	Convert a Word (docx) to a Markdown (md) file
`write_config()`	write_config: helper for Writing the Config file for setting up the omicser databases
`write_db_conf()`	write_db_conf: helper for writing the ui config options for the database
`write_db_meta()`	write_db_meta: helper for writing the database meta info

Reference